Elfine Peterson Tjio wrote: > I'm trying to make a program that reads Fasta file and print it out. I used > the SeqIO module and the results is: > > 'ATGGTCAT....SingleAlphabet()' > > For this purpose, should I use SeqIO or Fasta? > > for example: > > from Bio import SeqIO > > or > > from Bio import Fasta > > I want it to print every letter. Can anyone point me to the right direction. > The newest biopython tutorial or book recommendation will be appreciated, > too.
Dear Elfine: The correct place for such a question is the BioPython discussion list at [EMAIL PROTECTED] You can subscribe to it here: http://lists.open-bio.org/mailman/listinfo/biopython/ The newest BioPython tutorial (last updated 16 March 2007) can be found at http://biopython.org/DIST/docs/tutorial/Tutorial.pdf SeqIO and Fasta should both work fine. You could also try >>> help(SeqIO) >>> help(Fasta) after your import for some further information. Cheers, Christof -- http://mail.python.org/mailman/listinfo/python-list
