Steve Dower added the comment:

Good question on the extra "Python" directory - I don't recall exactly why that 
was there, but I suspect it was for consistency with something - probably 
{userbase} from sysconfig.

Also, thanks for catching the user scheme difference. We shouldn't really be 
installing any packages into the Roaming profile at all, but as this is a 
highly underused feature it's not a big deal. (And since we add platform tags 
to .pyd files now it can actually be used successfully, but I suspect that 
involves more care.)

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Python tracker <rep...@bugs.python.org>
<http://bugs.python.org/issue25164>
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