Zachary Ware added the comment:

This is fairly wild speculation on my part, but I think Python is likely at the 
bottom of the suspect list for whose bug this is, after (in order):

1) your own code
2) matplotlib
3) Tcl/Tk

I would suggest trying to come up with the shortest reproducer you can (which 
should shine light on any bugs in your code), report your problem to 
matplotlib[1] with that reproducer attached, and link between this issue and 
that one so we can all keep track of it.  We'll keep this report open until 
somebody claims the bug.

Adding Serhiy as the resident Tkinter expert, in case you have insight I don't.

[1] https://github.com/matplotlib/matplotlib/issues

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nosy: +serhiy.storchaka

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<http://bugs.python.org/issue22757>
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