Hello Gerald I think you are looking for this type of diagram. I drew it using PyMOL only. I used it in one of the papers (See. Journal of Molecular Structure 1175 (2019) 481-487), in which I used 'PyDescriptor' for QSAR work. PyDescriptor is a PyMOL plugin. [image: ring5and7A.png]
With Warm Regards *Dr. Vijay H. Masand* Department of Chemistry, Vidya Bharati College, Amravati, 444 602 Maharashtra, India. Phone number- +91-9403312628 https://sites.google.com/site/vijaymasand/ On Wed, Dec 2, 2020 at 3:01 PM Gerald Keller <gerald.kel...@uni-wuerzburg.de> wrote: > Hi there, > > I am trying to draw circles with the cgocircle script provded on the > pymol-wiki. > I am able to draw the circle but I couldn't find out how to ajust the > orientation of the circle. I also haven't found out a rule to influence the > drawing orientation by chaning the camera view. > > What I am actually trying to draw are circles or spheres around a given > coordinate with different radii. > Drawing spheres with a given transparency would work for my purpose and is > independed from the camera view. Nevertheless, when I ray the image, only > the outermost sphere is displayed. > > Are there any suggestions about this? > > Best, > Gerald > _______________________________________________ > PyMOL-users mailing list > Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net > Unsubscribe: > https://sourceforge.net/projects/pymol/lists/pymol-users/unsubscribe
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