Dear Clarisa,
> On Sep 10, 2020, at 2:56 AM, Clarisa Alvarez <clarisae.alva...@gmail.com> > wrote: > > Dear David > Thank you very much!you do not know how much you helped me!!Thanks! > I have two questions: > - with you sent I only saw lateral chains, how could I see backbone? You want to click on “H” button and hide all. Then click on “S” ribbons to see backbone atoms. > - I might have missed the amino acid grouping, I do not understand. The group refer to acid and base and non-charge groups that play factor in generating the electrostatic potential. I am just curious have you tried this type of simple model: q1q2/4*Pier^2 Best Regards, David > Thank you again! > Have a good day. > Clarisa. > > El mié., 9 sept. 2020 a las 19:11, David Gae (<dd...@ucdavis.edu > <mailto:dd...@ucdavis.edu>>) escribió: > > select pos,(resn arg+lys+his) > show sticks, (pos and !name c+n+o) > color marine,pos > disable pos > select neg,(resn glu+asp) > show sticks, (neg and !name c+n+o) > color red,neg > disable neg > select neutral, (resn > gly+ala+val+ile+leu+met+ser+cys+trp+phe+tyr+pro+gln+asn+phe) > show sticks, (neutral and !name c+n+o) > color yellow, neutral > > I might have missed the amino acid grouping, I hope you check it before you > use it. > Hope this helps, > > > >> On Sep 9, 2020, at 4:28 AM, Clarisa Alvarez <clarisae.alva...@gmail.com >> <mailto:clarisae.alva...@gmail.com>> wrote: >> >> GenScript >> Dear all, Thanks in advance. >> I have this problem, I have two pockets with electrostatic potential made by >> APSB, does anyone know how I could tell which residue contributes to each >> potential in each protein? >> Thanks in advance. >> Regards, >> Clarisa. >> _______________________________________________ >> PyMOL-users mailing list >> Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net >> <http://www.mail-archive.com/pymol-users@lists.sourceforge.net> >> Unsubscribe: >> https://sourceforge.net/projects/pymol/lists/pymol-users/unsubscribe >> <https://sourceforge.net/projects/pymol/lists/pymol-users/unsubscribe>
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