Hi, Pymol users, Would anyone help me to transform the calculated pore profile along with the protein.
I have a couple of proteins and I calculated the pore profiles using MOLE. I downloaded the pymol scripts to regenerate the pores with the protein. when I aligned these proteins, the pore apparently won't be aligned. One solution is aligning all the proteins and then calculating the pore profiles. The issue is anytime I have a new protein, I need align it first and then calculate the pore profile. Would there be a better way in this scenario if I already have the pore profiles? I guess object_matrix can do this. Then the question is how can I get the transformation matrix from align/super/cealign, and then transform the pore profile. All recommendations and suggestions are welcome! Appreciating your help! Thanks, Charles
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