hello there, As a part of my scripting routine, I would like to use pymol in no-gui mode (directly in the linux shell) to do the following things: 1) load in pymol 3 conformations of the same protein, which are defined as A.pdb B.pdb C.pdb 2) superimpose C to A using "super" or alternatively (which is better) "alignall" to A 3) change background of the session to white :-) 4) save the pymol session for the superimposed A B and C as the *.pse output file
could you suggest me 1 string command for pymol, which I can directly use in shell terminal to do the mentioned routines in no-gui mode? thanks you!! James _______________________________________________ PyMOL-users mailing list Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net Unsubscribe: https://sourceforge.net/projects/pymol/lists/pymol-users/unsubscribe
