Hi Elmira, If you are using windows, Open Source PyMOL for python3.6 can be found here: https://www.lfd.uci.edu/~gohlke/pythonlibs/#pymol
If you are using Mac, Open Source PyMOL via macports still depends on Python2.7 by default. However, you can install PyMOL built with the macports python3.6 interpreter by using the variant flag python36. (e.g., sudo port install pymol +python36). See https://www.macports.org/ports.php?by=library&substr=pymol I tested this command this morning, and it worked for me with the Mohave OS. It takes about twenty minutes for the dependencies to install. I was able to "import pymol" and run "print pymol.__path__", which returned the path to macports python3.6. Earlier, I had made a kernel for mapcorts python3.6 so this interpreter could be used in jupyter notebook. If you are using Linux, see the PyMOL wiki for help https://pymolwiki.org/index.php/Linux_Install. Best regards, Blaine Blaine Mooers, Ph.D. Associate Professor Department of Biochemistry and Molecular Biology College of Medicine University of Oklahoma Health Sciences Center S.L. Young Biomedical Research Center (BRC) Rm. 466 975 NE 10th Street, BRC 466 Oklahoma City, OK 73104-5419 ________________________________________ From: Elmira Nazarshodeh [elmira.nazarsho...@gmail.com] Sent: Tuesday, April 23, 2019 8:35 AM To: pymol-users@lists.sourceforge.net Subject: [EXTERNAL] [PyMOL] Problem with pymol in python 3.6 Hello I am going to work with pymol through python 3.6. When I type (from pymol import cmd) in the jupyter notebook, I get the following error: ModuleNotFoundError: No module named 'pymol' Could you please help me how can I fix the problem? How can I install a version of pymol that is compatible with python 3.6.? Best Regards _______________________________________________ PyMOL-users mailing list Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net Unsubscribe: https://sourceforge.net/projects/pymol/lists/pymol-users/unsubscribe
