Dear Mohammad
Please see the PDB plugin which colours each sequence or structural domain
differently.
https://pymolwiki.org/index.php/PDB_plugin
This is used to produce the images on the PDBe web pages.
For example see a titin with multiple copies of a CATH domain.
https://www.ebi.ac.uk/pdbe/entry/pdb/2rjm/biology
Regards
John
From: Mohammad Goodarzi [mailto:[email protected]]
Sent: 08 August 2018 16:13
To: [email protected]
Subject: [PyMOL] Color change of different domain
I have a protein in PDB called "3E9D"
I first get the seqeuence then I go here
https://www.ncbi.nlm.nih.gov/Structure/cdd/wrpsb.cgi
and I find the domains. Now I am trying to change the color accordingly
Now I am trying to change the color of each domain with different color
first I change the background to white
bg_color white
show cartoon
hide lines
Can you please tell me how to change the color of each domain to different
colors ?
Thanks
Mohammad
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