resending... I hope you can see the link to the screenshots in my gdrive Here is the code merged. It works ...but the F1 key now zooms farther away from the residues..... :P firstF1.png <https://drive.google.com/file/d/0B9tqXyDsq9YIYWxTSlhaa2hoUlR3dkFhZzE0Tm83YmZjQ1pN/view?usp=drive_web> manualorient.png <https://drive.google.com/file/d/0B9tqXyDsq9YIMUFvNGNxZE9iekNic0Y4eXU0eGx4blBBZ2ZN/view?usp=drive_web> secondF1.png <https://drive.google.com/file/d/0B9tqXyDsq9YIal9aanptTS04ekREeVZkZGVMTXRKc2VuSlpN/view?usp=drive_web>
2018-06-15 14:03 GMT-05:00 Murpholino Peligro <murpholi...@gmail.com>: > Wow. I like it. Thanks. > > I got 8 structures with their respective maps. So in order to view them > all at once, interactively, I think I only need to merge my code with yours > and ...add a ramp for every map? I am gonna try that now. > Here's my code (pml attached) > > If you want to have my maps and pdbs please tell me. > > > 2018-06-15 13:22 GMT-05:00 Thomas Holder <thomas.hol...@schrodinger.com>: > >> Hi Murpholino, >> >> How about an interactive version instead of a fix-speed movie? The >> attached script maps the F1 key to advance to the next residue, and F2 to >> go back. It also colors atoms by density fit (red if they don't fit into >> the 1.2 sigma shell). It will only show sticks for the current residue, to >> make it more visible. >> >> Cheers, >> Thomas >> >> >> >> >> >> > On Jun 15, 2018, at 4:36 PM, Murpholino Peligro <murpholi...@gmail.com> >> wrote: >> > >> > Dear PyMOL users...... >> > I found this bb_inspector at https://pymolwiki.org/index.ph >> p/MovieSchool_4 >> > It kinda does what I want, so I tweak it little bit ... (*.pml attached) >> > If you run the script and play the movie you'll see that sometimes the >> sidechain is a little bit obscured by some density/atoms in the front. How >> do I make them more visible? >> > >> > Lots of thanks >> > >> > >> > >> > >> > >> > 2018-06-15 8:31 GMT-05:00 Murpholino Peligro <murpholi...@gmail.com>: >> > Dear PyMOL users... >> > >> > Is there a way to orient every sidechain and take a picture to produce >> a movie? >> > >> > Idea: By aligning the pdbs and maps and having them in the grid mode, >> with this movie I could f take a quick look at how well my electron density >> fits to all my models... >> > >> > Thanks >> > >> > <sc_inspector.pml>------------------------------------------ >> ------------------------------------ >> >> -- >> Thomas Holder >> PyMOL Principal Developer >> Schrödinger, Inc. >> >> >> >
sidebyside_interactive.pml
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