Dear all, I am trying to open a large trajectory file from a NAMD MD simulation on a Windows machine running Pymol 1.7.2.. In order to do this, I tried two things (both with defer_builds_mode 3):
- Opening the .dcd file using load_traj, I was able to load most of it (400 frames); however, if I try to load the entire file (500 frames/1.1 GB), Pymol crashes with a Runtime error once it gets to about 2GB RAM usage; - Converting the file to a PDB (and removing the solvent to save space), I can load around 1500 frames (1.1 GB); however, when I try to load a larger file (1.4 GB), Pymol crashes instantly with no message. A few notes: the machine has 8GB RAM and an integrated graphics card. Is there anything I can do? Thanks, Rui ------------------------------------------------------------------------------ The Command Line: Reinvented for Modern Developers Did the resurgence of CLI tooling catch you by surprise? Reconnect with the command line and become more productive. Learn the new .NET and ASP.NET CLI. Get your free copy! http://sdm.link/telerik _______________________________________________ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
