Hello.
I would like to know more about the type of interpolation that is done when
morph is called, and what calculations are done at each refinement cycle.
Is there a literature reference or previous forum discussion to which you
can point me?
>From my sifting through the internet, I settled on the likelihood that
refinement is done using the "molecular sculpting" algorithm that has been
employed since at least this discussion took place in 2002:
http://www.mail-archive.com/pymol-users@lists.sourceforge.net/msg00359.html
In other words, refinement is not done on the basis of energy differences,
Ramachandran plot, interatomic clashes, or other problems with geometry
that could arise at each interpolation step.
Is that correct? If so, is there a way to customize the refinement that's
done?
I am using MacPyMOL version 1.7.6.2.
Regards,
Emily.
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