Hi All, I’m trying to make an isomesh of EMD-6413 (a cryo map) in Pymol. It’s a large map with a lot of extra, not very clean. In Chimera I can just gaussian the map with a new map to the level I want with a slider and it looks good, but I’d much rather work in PyMOL!
PyMOL can gaussian maps, I do it all the time, but on maps that I create in PyMOL. How do I get an isomesh on EMD-6413 that I can gaussian? Normally I would use: alter all, q=1 set gaussian_resolution, 5 map_new mapA, gaussian, 1, pdb code, 6 isosurface surfA, mapA But in in this case I don’t want to use a pdb, just the cryo map. I can isosurface the cryo map with the following: isosurface mapname, EMD-6413, 4 (any number between 1-6) but that doesn’t allow me to apply the gaussian to the map… How do I create an isosurface with a gaussian? Thanks for any help, H. Adam Steinberg 7904 Bowman Rd Lodi, WI 53555 608/592-2366 ------------------------------------------------------------------------------ _______________________________________________ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
