Hi Yeping,
What is the PDB id you are working with? Perhaps you have to download the
biological assembly rather than asymmetric unit. I’d suggest you to go to the
PDBe entry (pdbe.org/PDBID) and from the quick links select download ‘Assembly
composition XML’. Take a look which assembly id has ‘preferred’ attribute se to
‘True’ and download corresponding assembly.
Hope it helps
Lukas Pravda
Central European Institute of Technology (CEITEC)
From: sunyeping [mailto:sunyep...@aliyun.com]
Sent: Wednesday, January 13, 2016 9:31 AM
To: pymol-users <pymol-users@lists.sourceforge.net>
Subject: [PyMOL] show the long helix filament
Dear all,
I am studying a published protein molecule which was claimed to be helical
symmetric. The pdb file contain 3 copies of this molecule arranged in
head-to-tail patern. The author claims that this interation is repeated in a
directional manner along the P31 screw axis. Does anyone know how to show the
whole long helix filament rather that just three protomer of this molecule? Can
pymol do this?
Best regards.
Yeping Sun
Institute of Microbiology, Chinese Academy of Sciences
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