Dear pymol-users
There is some trouble I end up with while using theseus from psico in
pymol. I am not sure what is causing this. Can anyone help me fix this one.
The log I get when executing theseus is given below.
thank you in advance,
Best Regards
Priyan
BEGIN THESEUS 3.0.0 >
I===-===-===-===-===-===-===-===-===-===-===-===-===-===-===-===-===-===-===-=I
I THESEUS: Maximum likelihood multiple superpositioning
I
I=-===-===-===-===-===-===-===-===-===-===-===-===-===-===-===-===-===-===-===I
Reading pdb file ...
Successfully read 2 models and/or structures
Selecting coordinates for superposition ...
Calculating superposition transformations ...
Aborting at iteration 2 ....
Traceback (most recent call last):
File "/media/XTAL/pymol/modules/pymol/parser.py", line 256, in parse
self.result=apply(layer.kw[0],layer.args,layer.kw_args)
File "/media/XTAL/pymol/modules/psico/fitting.py", line 712, in theseus
translations, rotations = _run_theseus(args, tempdir, preserve, quiet)
File "/media/XTAL/pymol/modules/psico/fitting.py", line 648, in
_run_theseus
handle = open(os.path.join(tempdir, 'theseus_transf2.txt'))
IOError: [Errno 2] No such file or directory:
'/tmp/tmpwXC24Y/theseus_transf2.txt'
------------------------------------------------------------------------------
One dashboard for servers and applications across Physical-Virtual-Cloud
Widest out-of-the-box monitoring support with 50+ applications
Performance metrics, stats and reports that give you Actionable Insights
Deep dive visibility with transaction tracing using APM Insight.
http://ad.doubleclick.net/ddm/clk/290420510;117567292;y
_______________________________________________
PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net)
Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users
Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
