if you have access to Gimp or photoshop and want to do this in just a few minutes… clip and render the surface how you want it, then without moving anything, unclip and render just the ligand. In any bitmap editing program layer the ligand image over the clipped surface image and merge the two into one image.
> On Jan 21, 2015, at 2:57 PM, Markus Heller <mhel...@cdrd.ca> wrote: > > Hello all, > > I'm trying to show a ligand in a binding site, and I'd like to selectively > clip the surface only. I haven't found anything on the web, only that it was > not possible a few years ago. > > Surely this has changed? > > Thanks and Cheers > Markus > > > -- > Markus Heller, Ph.D. > NMR Scientist > CDRD - The Centre for Drug Research and Development > 2405 Wesbrook Mall, Fourth Floor | Vancouver, BC V6T 1Z3 | Main: (604) > 827-1147 > Direct: (604) 827-1122 | F: (604) 827-1299 | E: mhel...@cdrd.ca | www.cdrd.ca > > > > > > > Follow us: > > This email and any files transmitted with it are confidential and intended > solely for the addressee. If you are not the named addressee you should not > disseminate, distribute, copy, or alter this email. > > > > ------------------------------------------------------------------------------ > New Year. New Location. New Benefits. New Data Center in Ashburn, VA. > GigeNET is offering a free month of service with a new server in Ashburn. > Choose from 2 high performing configs, both with 100TB of bandwidth. > Higher redundancy.Lower latency.Increased capacity.Completely compliant. > http://p.sf.net/sfu/gigenet > _______________________________________________ > PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) > Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users > Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net ------------------------------------------------------------------------------ New Year. New Location. New Benefits. New Data Center in Ashburn, VA. GigeNET is offering a free month of service with a new server in Ashburn. Choose from 2 high performing configs, both with 100TB of bandwidth. Higher redundancy.Lower latency.Increased capacity.Completely compliant. http://p.sf.net/sfu/gigenet _______________________________________________ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
