Great, thanks!
Matt
On 01/20/2015 08:01 PM, Osvaldo Martin wrote:
Hi Matt,
Try removing the "BEGIN"
sph1 = [ALPHA, 0.5, COLOR, 1.0, 1.0, 1.0, SPHERE, -3.818, -28.181,
-15.016, 0.5]
cmd.load_cgo(sph1, "sph1", 1)
sph2 = [ALPHA, 1.0, COLOR, 1.0, 1.0, 1.0, SPHERE, -3.818, -28.181,
-15.016, 0.5]
cmd.load_cgo(sph2, "sph2", 1)
Cheers,
Osvaldo.
On Tue, Jan 20, 2015 at 7:19 PM, Matthew Baumgartner <mp...@pitt.edu
<mailto:mp...@pitt.edu>> wrote:
Hi,
I'm having some trouble using CGO spheres. When I create one, it
is not visible in the viewer, although there is an (apparently
empty) object in the object pane. It is somewhat confusing because
with some parameters the spheres ARE visible when ray tracing,
although they are still not visible when non ray traced.
I have not had this problem in the past, although I haven't tried
in a while (> 1 year).
I am using pymol v1.7.4.0 which is up to date from the SVN
repository (revision 4107). And I am on Ubuntu 14.04. I reproduced
this problem on another computer running 1.7.x.
To reproduce:
pymol -k #to eliminate setting in the .pymolrc
In pymol:
from pymol.cgo import *
sph1 = [BEGIN, ALPHA, 0.5, COLOR, 1.0, 1.0, 1.0, SPHERE, -3.818,
-28.181, -15.016, 0.5]
cmd.load_cgo(sph1, "sph1", 1)
This loads a seemingly empty object that is not visible when ray
tracing.
Setting the Alpha parameter to 1.0 allows it to be visible when
ray tracing, but not under normal conditions.
sph2 = [BEGIN, ALPHA, *1.0*, COLOR, 1.0, 1.0, 1.0, SPHERE, -3.818,
-28.181, -15.016, 0.5]
cmd.load_cgo(sph2, "sph2", 1)
Do you have any idea what the problem might be or settings that I
could check?
Thanks,
Matt Baumgartner
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