Hi Pymolers
I have solved my problem. I am using surface cavity_mode, 3. I need to
change the ray_interior_color instead of the surface color. I guess this
is because pymol is visualizing the interior of the surface not the
exterior.
-Yarrow
On Thu, Jul 24, 2014 at 11:08 AM, Yarrow Madrona <amadr...@uci.edu> wrote:
> I think the problem may have to do with the surface_cavity_mode being set
> to 3. I try to change the surface_cavity_mode but I still detect cavities
> instead of the surface. It seems like any option related to the surface is
> locked.
>
> -Yarrow
>
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