Hi Justin,

before loading the map, do:

PyMOL> set normalize_ccp4_maps, off

Assuming you are loading from a ccp4 map file. There is also
normalize_grd_maps and normalize_o_maps.

Cheers,
  Thomas

Biel, Justin wrote, On 07/23/14 21:50:
> Is it currently possible to contour map representations (i.e. isomesh)
> by absolute values (electrons per cubic angstroms) rather than by the
> map's sigma value? For example, this is useful when making figures
> comparing maps from two different structures.
> 
> Sincerely,
> Justin T. Biel
> Graduate Student
> University of California San Francisco
> Integrative Program in Quantitative Biology
> justin.b...@ucsf.edu

-- 
Thomas Holder
PyMOL
Schrödinger, Inc.

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