Hi Monica,
I haven't tested, but maybe you could try:
align PDB1 and (resi 80-120 or resi 160-220), PDB2 and (resi 80-120 or resi
160-220)
I.e. expanding the selection to both streches. Running sequential
alignments will replace existing ones.
How this may help.
/Andreas
On Jul 2, 2014 1:24 PM, "Monica Mittal" <monica.mitta...@gmail.com> wrote:
> Dear all
> I need to align lets say resi 80-120 and 160-220 from one protein to resi
> 80-120 and 160-220 in second protein. How can i do this.
> I tried following:
> align PDB1 and resi 80-120, PDB2 and resi 80-120
> this is for one set but how to do for two sets 80-120 as well as 160-220
> simultaneously.
> Thank you
> Monica
>
>
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Open source business process management suite built on Java and Eclipse
Turn processes into business applications with Bonita BPM Community Edition
Quickly connect people, data, and systems into organized workflows
Winner of BOSSIE, CODIE, OW2 and Gartner awards
http://p.sf.net/sfu/Bonitasoft
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