Hello,
I've been working through different tabs of the AD plugin, trying to find
out what works with PyMOL v.1.7.1.3. The radio buttons on the grid tab are
not working, but the biggest hurdle I've come against to this point is on
the receptor tab. The plugin will correctly import the receptor file I have
loaded into pymol, but when I click on "Generate Receptor", the following
error message pops up:
Error: 1
<type 'exceptions.WindowsError'> Exception in Tk callback
Function: <bound method Autodock.generate_receptor of
<pmg_tk.startup.autodock_plugin.Autodock instance at 0x000000000A4F42C8>>
(type: <type 'instancemethod'>)
Args: ()
Traceback (innermost last):
File "C:\Python27\lib\site-packages\Pmw\Pmw_1_3\lib\PmwBase.py", line
1747, in __call__
return apply(self.func, args)
File
"C:/Python27/Lib/site-packages/pymol/pymol_path/Pymol-Scripts-Pymol-script-repo/plugins\autodock_plugin.py",
line 1952, in generate_receptor
result, output = getstatusoutput(command)
File
"C:/Python27/Lib/site-packages/pymol/pymol_path/Pymol-Scripts-Pymol-script-repo/plugins\autodock_plugin.py",
line 54, in getstatusoutput
p = Popen(command.split(), stdout=PIPE, stderr=STDOUT, env=env)
File "C:\Python27\lib\subprocess.py", line 709, in __init__
errread, errwrite)
File "C:\Python27\lib\subprocess.py", line 957, in _execute_child
startupinfo)
<type 'exceptions.WindowsError'>: [Error 2] The system cannot find the file
specified
I'm not a python expert, but as far as I can tell the error lies with the
AD plugin not being able to find subprocess.py. I DO have subprocess.py in
my python 2.7 directory, but there is a slight difference my path name --
the actual location is "\Python27\Lib", whereas the AD plugin is looking
for subprocess.py in "\Python27\lib".
I don't know where in the autodock_plugin.py script it specifies the path
for locating subprocess.py, otherwise I would have fixed this by now. Any
help would be greatly appreciated, as I'm not sure if Seeliger is actively
maintaining the plugin anymore.
Blake
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