Hi,
I'm trying to superimpose a small structure to a residue of a protein.
When I use align or pair_fit to do this, the superposition works, but for some
weird reason I can't see my small structure anymore. Like it's whole structure
disappears. The superimposed atoms are there - but then those are overlapped by
the same atoms of the residue, so you can't see them anyway. I've tried
pair_fit some while ago and I recall using it without a problem. Why am I
suddenly having this problem?
Can somebody help me?
Thanks,
I-Ji
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