Hi Osvaldo,
the memory leak has been fixed in SVN rev 4074.
Cheers,
Thomas
On 04 Apr 2014, at 15:54, Thomas Holder <thomas.hol...@schrodinger.com> wrote:
> Hi Osvaldo,
>
> you are right, I can reproduce this. We'll look into it and let you know when
> it has been fixed.
>
> Cheers,
> Thomas
>
> On 02 Apr 2014, at 20:30, Osvaldo Martin <aloctavo...@gmail.com> wrote:
>> Hi,
>>
>> I need to run an script based on PyMOL for a thousands of proteins. The
>> problem is that even when I delete all object the RAM usage keeps
>> increasing. I am using PyMOL 1.7 on ubuntu 14.04 (beta 2).
>>
>>
>> my script looks like this.
>>
>> import __main__
>> __main__.pymol_argv = ['pymol','-qc']
>> import pymol
>> from pymol import cmd, stored
>> import glob
>>
>> pdb_files = glob.glob('*.pdb')
>> for protein in pdb_files:
>> cmd.load(protein)
>> "some code here"
>> cmd.delete('all')
>>
>>
>> I tried the following.
>>
>> 1) removing the "some code here"
>> 2) adding cmd.reinitialize()
>> 3) adding cmd.set('suspend_undo', 1)
>> (https://www.mail-archive.com/pymol-users@lists.sourceforge.net/msg11126.html)
>>
>> Cheers and thanks in advance.
--
Thomas Holder
PyMOL Developer
Schrödinger, Inc.
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