Hi Durga, it looks like you haven't loaded the PyDeT plugin. Instead of tracking the problem down or fixing PyDeT, I can offer a different script that I wrote. If you run the script, it adds a "delaunay" command. You need to have the "qdelaunay" executable installed on your system.
Download the script: https://raw.githubusercontent.com/speleo3/pymol-psico/master/psico/geometry.py Example: PyMOL> fetch 1ubq, async=0 PyMOL> run geometry.py PyMOL> delaunay name CA Hope that helps. Cheers, Thomas On 25 Mar 2014, at 15:23, KanakaDurga Addepalli <kadde...@masonlive.gmu.edu> wrote: > Hi, > I am a total newbie and just want to get some delaunay images for my proteins > using PyDeT. > > I am trying to get the PyDeT plugin to work since yday but it throws up an > exception > > PyMOL>pydet pt, name c > Traceback (most recent call last): > File > "/Volumes/Data/scm/vikki/bld/MacPyMOL.app/pymol/modules/pymol/parser.py", > line 464, in parse > File "<string>", line 1 > pydet pt, name c > > Could you please help, > thanks. -- Thomas Holder PyMOL Developer Schrödinger, Inc. ------------------------------------------------------------------------------ Learn Graph Databases - Download FREE O'Reilly Book "Graph Databases" is the definitive new guide to graph databases and their applications. Written by three acclaimed leaders in the field, this first edition is now available. Download your free book today! http://p.sf.net/sfu/13534_NeoTech _______________________________________________ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
