Hi, Recently, when I use pymol to load one pdb file, I got the following error and the Pymol is closed. I install pymol from soure code, and it worked no problem .
Who can give me some advice ? thanks a lot. Jacky # the error strart here HEADER PRION PROTEIN 31-MAR-97 1AG2 TITLE PRION PROTEIN DOMAIN PRP(121-231) FROM MOUSE, NMR, 2 TITLE 2 MINIMIZED AVERAGE STRUCTURE COMPND MOL_ID: 1; COMPND 2 MOLECULE: MAJOR PRION PROTEIN; COMPND 3 CHAIN: A COMPND 4 FRAGMENT: DOMAIN 121 - 231; COMPND 5 SYNONYM: PRP(121-231); COMPND 6 ENGINEERED: YES ObjectMolecule: Read secondary structure assignments. ObjectMolecule: Read crystal symmetry information. Symmetry: Found 1 symmetry operators. CmdLoad: "/media/home/mabiao/1ag2.pdb" loaded as "1ag2". LLVM ERROR: Cannot select: 0x33caca0: i32 = fneg 0x3445650 [ID=398] 0x3445650: i32 = extract_vector_elt 0x332f030, 0x347a7f0 [ID=394] 0x332f030: v4i32 = X86ISD::PSHUFD 0x33d6170, 0x3339740 [ID=390] 0x33d6170: v4i32 = X86ISD::PSHUFD 0x3453b30, 0x33d3840 [ID=387] 0x3453b30: v4i32 = scalar_to_vector 0x3453630 [ID=385] 0x3453630: i32,ch = load 0x34772c0, 0x3453730, 0x333a350<LD4[%405]> [ORD=964] [ID=384] 0x3453730: i64 = add 0x3453830, 0x343e3e0 [ORD=962] [ID=379] 0x3453830: i64,ch = load 0x34772c0, 0x33d5d70, 0x333a350<LD8[%282]> [ORD=961] [ID=373] 0x33d5d70: i64,ch = CopyFromReg 0x2dbaf10, 0x332a610 [ORD=754] [ID=113] 0x332a610: i64 = Register %vreg26 [ORD=754] [ID=1] 0x333a350: i64 = undef [ORD=773] [ID=18] 0x343e3e0: i64 = Constant<48> [ORD=853] [ID=34] 0x333a350: i64 = undef [ORD=773] [ID=18] 0x33d3840: i8 = Constant<0> [ID=82] 0x3339740: i8 = Constant<3> [ID=111] 0x347a7f0: i64 = Constant<0> [ID=81] In function: fs34_variant0_partial PyMOL: abrupt program termination. # the error end here. ------------------------------------------------------------------------------ Rapidly troubleshoot problems before they affect your business. Most IT organizations don't have a clear picture of how application performance affects their revenue. With AppDynamics, you get 100% visibility into your Java,.NET, & PHP application. Start your 15-day FREE TRIAL of AppDynamics Pro! http://pubads.g.doubleclick.net/gampad/clk?id=84349831&iu=/4140/ostg.clktrk _______________________________________________ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net