I just upgraded to Pymol 1.6.0.0 on Windows 7, and Caver 3.01, which
worked nicely on Pymol 1.5, has stopped working. I've appended the error
message below. Has anyone else had problems with the Caver 3 plugin? Can
anyone decipher the Tk callback? I know what the 'no such file' error is
- there is no output generated.
Thanks,
Jed
java -Xmx500m -cp "C:/Program Files (x86)/Caver3/lib" -jar "C:/Program
Files (x86)/Caver3/caver.jar" -home "C:/Program Files (x86)/Caver3" -pdb
"C:/Users/Jed/modeling/caver/caver_output/6/inputs" -conf
"C:/Users/Jed/modeling/caver/caver_output/6/inputs/config_2013-11-07-11-58.txt"
-out "C:/Users/Jed/modeling/caver/caver_output/6"
Error: 1
<type 'exceptions.IOError'> Exception in Tk callback
Function: <bound method AnBeKoM.details of
<pmg_tk.startup.Caver3_0_1.AnBeKoM instance at 0x000000000B5C0B08>>
(type: <type 'instancemethod'>)
Args: ()
Traceback (innermost last):
File "C:\Program
Files\PyMOL\PyMOL/modules\Pmw\Pmw_1_2\lib\PmwBase.py", line 1747, in
__call__
return apply(self.func, args)
File "C:\Program
Files\PyMOL\PyMOL/modules\pmg_tk\startup\Caver3_0_1.py", line 634, in
details
fc = self.loadFileContent("%s/warnings.txt" % (self.out_dir))
File "C:\Program
Files\PyMOL\PyMOL/modules\pmg_tk\startup\Caver3_0_1.py", line 638, in
loadFileContent
handler = open(file)
<type 'exceptions.IOError'>: [Errno 2] No such file or directory:
'C:/Users/Jed/modeling/caver/caver_output/2/warnings.txt'
--
------------------------
Jed Goldstone, PhD
Research Specialist
Woods Hole Oceanographic Institution
Redfield 3-52 MS#32
Woods Hole, MA 02543
http://www.whoi.edu/hpb/Site.do?id=481
Phone: 508-289-4823
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