Hi again,

A short "revision" on the 'background color' problem (when setting 
background color to 'white' the background of the alternative command 
text window (ESC key) remains black and text is not visible).

Anyone else experiencing this problem?

I (now) think it is unrelated to the sequence number color issue. And it 
seems unrelated to the operating system used. It rather seems to be 
related to the graphics card/driver used and the PyMOL version used (see 
below).

I checked two computers with different NVIDIA graphics cards, several 
NVIDIA drivers and Linux and Windows, respectively.

Results:

Linux 64-bit / NVIDIA Quadro 4000 (NVIDIA driver 304.88) / PyMOL 1.6.0.0 
Incentive Build: problem occurs
Linux 64-bit / NVIDIA Quadro 4000 (NVIDIA driver 304.88) / PyMOL 1.5.0.5 
Incentive Build: OK - no problem!

Windows 7 64-bit / NVIDIA Quadro 4000 (NVIDIA driver 307.45) / PyMOL 
1.6.0.0 Incentive Build: problem occurs
Windows 7 64-bit / NVIDIA Quadro 4000 (NVIDIA driver 311.66) / PyMOL 
1.6.0.0 Incentive Build: problem occurs

Linux 32-bit / NVIDIA Quadro FX 1000 (NVIDIA driver 173.14.30) / PyMOL 
1.6.0.0 Incentive Build: OK - no problem!

Hope this helps to narrow-down the issue.

Thanks,
Christoph


I wrote:
> Hi,
>
> I experience the same with WinPyMOL 1.6.0.0 Incentive Build (running 
> under Windows 7, NVidia Quadro 4000) - but not under Linux PyMOL 1.6.0.0.
>
> In addition I have the following related problem in WinPyMOL 1.6.0.0: 
> when setting the background color (of the graphics window) to white, 
> the background of the text console (switching with ESC key) remains 
> black. In this case the text in this window is not visible at all 
> (because it assumes it has white background and thus text color is 
> inverted). When the background color is set to 'light grey' the text 
> color becomes 'dark grey' (still on black background...).
>
> I have not experienced this problem in previous WinPyMOL Incentive 
> Builds.
>
> Christoph
>
>
>> Hi everybody,
>>
>> Using MacPyMOL 1.6.0.0 Incentive Build, I no longer can see residue
>> numbers in the sequence if the background is set to white. I have been
>> playing with all the seq_view_* settings (thanks for documenting them
>> clearly within the Edit All Settings window!), especially
>> seq_view_label_color, and this setting works if the background is not
>> set to white. If the background is white (regardless of opaque
>> background or not), many colors I tried display no font (or likely black
>> font), *but* some colors do, and some colors display incorrect colors.
>>
>> RGB/CMYK colors (black, red, green, blue, yellow, cyan, magenta) and
>> white for sequence numbers do not show. Grey, purple and brown look
>> fine, but pink is a dimmed light blue, orange is green, and aquamarine
>> is brown. After having too much fun with these colors, I thought I
>> report this.
>>
>> Same on PyMOLX11Hybrid, and fink-built 1.6.0.0, but fink-built version
>> catches an error as it is starting, which may be related:
>> libpng warning: iCCP: known incorrect sRGB profile
>>
>> Working on a Mac 10.6.8.
>>
>> Best,
>> Engin
>>
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