Hi Syeda, PyMOL doesn't read PSF files, you need to provide the topology as PDB or any other format known to PyMOL.
The DCD trajectory can be loaded with "load_traj", after loading the topology: PyMOL> load topology.pdb, somename PyMOL> load_traj trajectory.dcd, somename, 1 See also: http://pymolwiki.org/index.php/Load_Traj Cheers, Thomas Syeda Hira Batool wrote, On 07/11/13 08:36: > Hello! I have psf and dcd files.I want to read them using my own > script.So I want to know how PyMol reads dcd files.Can you please help > me out in this regard by providing me some helping material or a script. > Thank you > > Hira Batool > Student of BS-Bioinformatics > Biosciences Department > COMSATS Institute of Information Technology > Islamabad, PAKISTAN -- Thomas Holder PyMOL Developer Schrödinger Contractor ------------------------------------------------------------------------------ See everything from the browser to the database with AppDynamics Get end-to-end visibility with application monitoring from AppDynamics Isolate bottlenecks and diagnose root cause in seconds. Start your free trial of AppDynamics Pro today! http://pubads.g.doubleclick.net/gampad/clk?id=48808831&iu=/4140/ostg.clktrk _______________________________________________ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
