Hi Appu,

interpolation between two conformations is called "morphing". You can do
this with the incentive version of PyMOL, which includes an additional
component called RigiMOL.

With incentive PyMOL 1.6, you can morph directly from the object menu:
A > generate > morph

See also:
http://pymolwiki.org/index.php/Morph         (PyMOL 1.6)
http://pymolwiki.org/index.php/Rigimol.morph (older PyMOL versions)

Hope that helps.

Cheers,
  Thomas

Appu kumar wrote, On 07/09/13 07:13:
> Dear All,
>      I am working on an enzyme which close it active site
> when react with substrate. I have solved the structure in both open and
> closed conformation. Now i want to make the movie of showing a series of
> change in going from open to close conformation. please tell me how to
> mkae movie.
> Thank you
> Appu

-- 
Thomas Holder
PyMOL Developer
Schrödinger Contractor

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