Dear Pymol users,
>
> I'm a begginer with command lines in Pymol. I'm trying to complete the
> following task through a pymol script:
>
> 1) Write a file named "file1.txt" with an aminoacid sequence (e.g. CVGLTUW)
>
> 2) Open a .pdb molecule (file2.pdb) with the same number of residues, but
> with a different sequence (e.g. ALTWSIK)
>
> 3) Write a code where the pymol will pick each residue of the file2.pdb (I
> believe that this could be made by the mutagenesis wizard command) and
> mutate for the respective aminoacid written in my file1.txt
>
> 4) Save the new filein .pdb format (file3.pdb)
>
> I'll be very greatful for any help!
>
> Thanks in advance,
> --
> M.Sc. Maurício Menegatti Rigo
> Núcleo de Bioinformática do Laboratório de Imunogenética
> Departamento de Genética
> Instituto de Biociências
> Universidade Federal do Rio Grande do Sul - Campus do Vale
> Av. Bento Gonçalves, 9500 - Bairro Agronomia - Prédio 43323 M
> CEP:91501-970 Caixa Postal 15053
> Porto Alegre, RS, Brasil
> Tel: +55 51 3308 9938
>
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