Hi Adam, set cartoon_trace_atoms
set cartoon_throw, 1 If you want secondary structures, then you'll need to assign them using the 'alter' command. Cheers, -- Jason On Fri, May 18, 2012 at 5:13 PM, H. Adam Steinberg <a...@steinbergs.us> wrote: > Hi all, > > If you open a c-alpha pdb (3ixz for example) in PyMol, you can show the > c-alphas as spheres, or you can show a cartoon as a tube (ribbon like) but > you can make a traditional flat faced PyMol cartoon. Yet when you open the > same pdb in JMol it shows the traditional PyMol cartoon as the default. :P > > Why can't PyMol show the traditional cartoon like JMol does? and if JMol is > faking the traditional cartoon, why can't we get PyMol to also fake the > traditional cartoon? :) > > Thanks for any insight. > > Adam > > H. Adam Steinberg > 7904 Bowman Rd > Lodi, WI 53555 > 608/592-2366 > > > ------------------------------------------------------------------------------ > Live Security Virtual Conference > Exclusive live event will cover all the ways today's security and > threat landscape has changed and how IT managers can respond. Discussions > will include endpoint security, mobile security and the latest in malware > threats. http://www.accelacomm.com/jaw/sfrnl04242012/114/50122263/ > _______________________________________________ > PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) > Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users > Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net -- Jason Vertrees, PhD PyMOL Product Manager Schrödinger, LLC (e) jason.vertr...@schrodinger.com (o) +1 (603) 374-7120 ------------------------------------------------------------------------------ Live Security Virtual Conference Exclusive live event will cover all the ways today's security and threat landscape has changed and how IT managers can respond. Discussions will include endpoint security, mobile security and the latest in malware threats. http://www.accelacomm.com/jaw/sfrnl04242012/114/50122263/ _______________________________________________ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
