one more thing: PyMOL will not render twice if using prior=1:

   cmd.ray(..., renderer=0)
   cmd.png(..., prior=1)

Cheers,
   Thomas

João Rodrigues wrote, On 04/18/12 09:54:
> Thanks for the tips all of you. As I told Jason, the renderer option was 
> the billionth thing I tried to make it work.. all default settings didn't.
> 
> So it comes down to what Thomas said:
> 
>     if running in batch mode, there is no opengl window to capture from
>     and PyMOL will always fall back to ray tracing, since it is the only
>     way to obtain a figure in this mode.
> 
> 
> So, in a script, I shouldn't use ray. I should just use png directly and 
> allow it to ray. It worked.
> 
> Cheers,
> 
> João [...] Rodrigues
> http://nmr.chem.uu.nl/~joao

-- 
Thomas Holder
MPI for Developmental Biology
Spemannstr. 35
D-72076 Tübingen

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