Daniel,

Filling clipped spheres is not yet available. We'll look at adding it.

Cheers,

-- Jason

On Tue, Feb 14, 2012 at 12:00 PM, Daniel Larsson <lars...@xray.bmc.uu.se> wrote:
> Thanks for the quick reply.
>
> A closely related issue is that clipped spheres are rendered very strangely. 
> It seems they only consists of a half-sphere and if the clipping plane 
> intersects the sphere in the front-most half, then you can see straight 
> through it.
>
> Daniel
>
>
> On Feb 14, 2012, at 17:50 , Jason Vertrees wrote:
>
>> Daniel,
>>
>> # reset the setting
>>
>> set ray_interior_color, default
>>
>> # set the setting for each object
>>
>> set ray_interior_color, marine, protA
>>
>> set ray_interior_color, magenta, protB
>>
>>
>> PyMOL does not support this via the 'draw' command (unless you set
>> draw_mode, 3, but that's just ray tracing). Please file an RFE and
>> we'll look into it.
>>
>> Cheers,
>>
>> -- Jason
>>
>> On Tue, Feb 14, 2012 at 11:17 AM, Daniel Larsson <lars...@xray.bmc.uu.se> 
>> wrote:
>>> Hi,
>>>
>>> Is there a way to render truncated/clipped objects as "dense". I.e. a "lid" 
>>> on clipped objects, such as surfaces or spheres.
>>>
>>> Want I want is something similar to the "A sliced image" example in the 
>>> wiki gallery (http://www.pymolwiki.org/index.php/Gallery), but with that 
>>> technique I can only pick one color for all molecules. I would like to set 
>>> "ray_interior_color" different for different molecules or objects. 
>>> Basically, I want the color to be the same on the inside as on the outside. 
>>> It would be great if it would work with the "draw" command as well.
>>>
>>> Is it possible with version 1.5? Or is there a chances of having this 
>>> implemented anytime soon?
>>>
>>> Daniel
>>>
>>>
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>>
>>
>>
>> --
>> Jason Vertrees, PhD
>> PyMOL Product Manager
>> Schrödinger, LLC
>>
>> (e) jason.vertr...@schrodinger.com
>> (o) +1 (603) 374-7120
>



-- 
Jason Vertrees, PhD
PyMOL Product Manager
Schrödinger, LLC

(e) jason.vertr...@schrodinger.com
(o) +1 (603) 374-7120

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