Nat, Thanks for this -- it's always good to expand the PyMOLWiki to new applications for PyMOL.
Cheers, -- Jason On Mon, Jan 23, 2012 at 2:08 PM, Nat Echols <nathaniel.ech...@gmail.com> wrote: > On Mon, Jan 23, 2012 at 12:42 PM, Simon Becker > <simon.bec...@uni-konstanz.de> wrote: >> I would like to visualize the intermediate structures my program >> produces during the computation cycle. Every iteration it generates a >> new structure. Is there a way to display this structure in pymol, using >> e.g. a pipe? Does anyone have experience with this, is there even a >> tutorial or manual entry that I failed to find? > > Okay, I have added a couple of wiki pages: > > http://www.pymolwiki.org/index.php/Monitor_file_continuously > http://www.pymolwiki.org/index.php/XML-RPC_server > > The second method is much more complex (and easy to break if the > networking does not behave), but far more powerful. > > -Nat > > ------------------------------------------------------------------------------ > Try before you buy = See our experts in action! > The most comprehensive online learning library for Microsoft developers > is just $99.99! Visual Studio, SharePoint, SQL - plus HTML5, CSS3, MVC3, > Metro Style Apps, more. Free future releases when you subscribe now! > http://p.sf.net/sfu/learndevnow-dev2 > _______________________________________________ > PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) > Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users > Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net -- Jason Vertrees, PhD PyMOL Product Manager Schrodinger, LLC (e) jason.vertr...@schrodinger.com (o) +1 (603) 374-7120 ------------------------------------------------------------------------------ Try before you buy = See our experts in action! The most comprehensive online learning library for Microsoft developers is just $99.99! Visual Studio, SharePoint, SQL - plus HTML5, CSS3, MVC3, Metro Style Apps, more. Free future releases when you subscribe now! http://p.sf.net/sfu/learndevnow-dev2 _______________________________________________ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
