Hi Vivek.

I will suggest looking at:
http://pymolwiki.org/index.php/Rotkit

Best
Troels Linnet

2011/12/29 Jason Vertrees <jason.vertr...@schrodinger.com>

> Vivek,
>
> Yes, it is.  Please read the web page I suggested.
>
> Cheers,
>
> Jason
>
> Sent from my android.
> On Dec 28, 2011 9:04 PM, "Vivek Ranjan" <vran...@gmail.com> wrote:
>
>> Is it possible to define an arbitrary axis (say a line connecting two
>> atoms).
>>
>> Thanks,
>>
>> Vivek
>>
>> On Wednesday, December 28, 2011, Jason Vertrees <
>> jason.vertr...@schrodinger.com> wrote:
>> > Hi Vivek,
>> >
>> > Check out the "rotate" command (http://pymolwiki.org/index.php/Rotate).
>> >
>> > Cheers,
>> >
>> > -- Jason
>> >
>> > On Wed, Dec 28, 2011 at 1:58 PM, Vivek Ranjan <vran...@gmail.com>
>> wrote:
>> >> Hello,
>> >>
>> >> I would like to rotate a group of atoms around an axis defined by line
>> >> connecting two atoms in the group. Is it possible in Pymol ? How to do
>> >> it ?
>> >>
>> >> --
>> >> Thank you and Regards,
>> >>
>> >> Vivek Ranjan
>> >>
>> >>
>> ------------------------------------------------------------------------------
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>> >
>> > --
>> > Jason Vertrees, PhD
>> > PyMOL Product Manager
>> > Schrodinger, LLC
>> >
>> > (e) jason.vertr...@schrodinger.com
>> > (o) +1 (603) 374-7120
>> >
>>
>> --
>> Thank you and Regards,
>>
>> Vivek Ranjan
>>
>
>
> ------------------------------------------------------------------------------
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> virtual desktops. With this all-in-one solution, easily deploy virtual
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infrastructure or vast IT resources to deliver seamless, secure access to
virtual desktops. With this all-in-one solution, easily deploy virtual 
desktops for less than the cost of PCs and save 60% on VDI infrastructure 
costs. Try it free! http://p.sf.net/sfu/Citrix-VDIinabox
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