Hi James, The 2D representation of secondary structures you show, is not possible with PyMOL. You would need to extract the secondary and code up the solution yourself. I bet there are servers out there that will do this for you,
Cheers, -- Jason On Sun, Nov 20, 2011 at 11:20 AM, James Starlight <jmsstarli...@gmail.com> wrote: > Dear PyMol Users! > > > I wounder to know about possible options for working with elements of > secondary structure of my pdb. > > E.g I want to obtain topology representation of my protein like tihs > http://strees.protres.ru/Top.%20photos/2.2.gif > > Is there any plugin for PyMol wich could help me with this ? > > Could you also show me tutorial where I could found possible examples > working with the SS elements? > > Thanks, > > James > > ------------------------------------------------------------------------------ > All the data continuously generated in your IT infrastructure > contains a definitive record of customers, application performance, > security threats, fraudulent activity, and more. Splunk takes this > data and makes sense of it. IT sense. And common sense. > http://p.sf.net/sfu/splunk-novd2d > _______________________________________________ > PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) > Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users > Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net > -- Jason Vertrees, PhD PyMOL Product Manager Schrodinger, LLC (e) jason.vertr...@schrodinger.com (o) +1 (603) 374-7120 ------------------------------------------------------------------------------ All the data continuously generated in your IT infrastructure contains a definitive record of customers, application performance, security threats, fraudulent activity, and more. Splunk takes this data and makes sense of it. IT sense. And common sense. http://p.sf.net/sfu/splunk-novd2d _______________________________________________ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
