Check get_dihedral. On Mon, Sep 5, 2011 at 6:56 PM, Joel Tyndall <joel.tynd...@otago.ac.nz> wrote: > Hi Martin, > > Whilst I have no competence what so ever in scripting, I believe the > measurement wizard does offer you the "torsion angle" option only it is > listed as a "dihedral". > > Hope this helps > > Joel > > _________________________________ > Joel Tyndall, PhD > > Senior Lecturer in Medicinal Chemistry > National School of Pharmacy > University of Otago > PO Box 56 Dunedin 9054 > New Zealand > Skype: jtyndall > http://www.researcherid.com/rid/C-2803-2008 > Pukeka Matua > Te Kura Taiwhanga Putaiao > Te Whare Wananga o Otago > Pouaka Poutapeta 56 Otepoti 9054 > Aotearoa > > Ph / Waea +64 3 4797293 > Fax / Waeawhakaahua +64 3 4797034 > > > -----Original Message----- > From: Martin Hediger [mailto:ma....@bluewin.ch] > Sent: Friday, 2 September 2011 9:49 p.m. > To: pymol-users > Subject: [PyMOL] Script for Torsion angles > > Dear List > Does anyone have a script to calculate torsion angles lying around? > Ideally, i would like to be able to enter x1, x2, x3, x4 and get the > (smaller) angle between the two normals of the planes defined by x1, x2, > x3 and x2, x3, x4, respectively. For some odd reason the measurment wizard in > my PyMOL install does not display torsion angles..!? > > Kind regards and thanks for any feedback. > Martin > > ------------------------------------------------------------------------------ > Special Offer -- Download ArcSight Logger for FREE! > Finally, a world-class log management solution at an even better price-free! > And you'll get a free "Love Thy Logs" t-shirt when you download Logger. > Secure your free ArcSight Logger TODAY! > http://p.sf.net/sfu/arcsisghtdev2dev > _______________________________________________ > PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) > Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users > Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net > > ------------------------------------------------------------------------------ > Special Offer -- Download ArcSight Logger for FREE! > Finally, a world-class log management solution at an even better > price-free! And you'll get a free "Love Thy Logs" t-shirt when you > download Logger. Secure your free ArcSight Logger TODAY! > http://p.sf.net/sfu/arcsisghtdev2dev > _______________________________________________ > PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) > Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users > Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net >
-- Thank you and Regards, Vivek Ranjan ------------------------------------------------------------------------------ Special Offer -- Download ArcSight Logger for FREE! Finally, a world-class log management solution at an even better price-free! And you'll get a free "Love Thy Logs" t-shirt when you download Logger. Secure your free ArcSight Logger TODAY! http://p.sf.net/sfu/arcsisghtdev2dev _______________________________________________ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
