In one PyMOL instance you can load many structures. They can be load 
into different objects, or different states of the same object.

If you mean using one command line to load multiple structures, since 
its grammar is very similar to python, I think you can always use 
semicolon to separate two commands:

fetch 1A00; fetch 1A07

this command will load both 1A00 and 1A07, but one after the other, not 
simultaneously.

On 06/29/2011 03:07 PM, leila karami wrote:
> Daer users
>
> I want to know how to load two separate pdb files simultaneously.
>
> any help will highly appreciated.
>
>
> ------------------------------------------------------------------------------
> All of the data generated in your IT infrastructure is seriously valuable.
> Why? It contains a definitive record of application performance, security
> threats, fraudulent activity, and more. Splunk takes this data and makes
> sense of it. IT sense. And common sense.
> http://p.sf.net/sfu/splunk-d2d-c2
>
>
>
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-- 
Hongbo ZHU
Postdoctoral Researcher
Structural Bioinformatics

Technische Universität Dresden
Biotechnology Center
Tatzberg 47/49
01307 Dresden, Germany

Tel: +49 (0) 351 463-40083
Fax: +49 (0) 351 463-40087
E-Mail:  hongbo.zhu at biotec
Webpage: www.biotec.tu-dresden.de

------------------------------------------------------------------------------
All of the data generated in your IT infrastructure is seriously valuable.
Why? It contains a definitive record of application performance, security 
threats, fraudulent activity, and more. Splunk takes this data and makes 
sense of it. IT sense. And common sense.
http://p.sf.net/sfu/splunk-d2d-c2
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