Hi Louise, In PyMOL v1.4 you can now do:
set dynamic_measures, on before rotating. PyMOL should update the distance in real time. Cheers, -- Jason On Thu, Apr 7, 2011 at 3:43 AM, Louise Carøe Vohlander Rasmussen <l...@mb.au.dk> wrote: > I loaded two forms A and B of the same molecule and aligned domain 1 > of A to domain 1 of B. Then I used the rotation command to rotate A, > until I was satisfied with the alignment. Now I want to measure > distances between A and B, but the distance lines go out into 'space'! > Pymol seems to calculate the distance as if A was still in its > original position and not the current position. How do I make Pymol > calculate the distance between A and B in the current position? > > Thanks, > Louise > > > ------------------------------------------------------------------------------ > Xperia(TM) PLAY > It's a major breakthrough. An authentic gaming > smartphone on the nation's most reliable network. > And it wants your games. > http://p.sf.net/sfu/verizon-sfdev > _______________________________________________ > PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) > Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users > Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net > -- Jason Vertrees, PhD PyMOL Product Manager Schrodinger, LLC (e) jason.vertr...@schrodinger.com (o) +1 (603) 374-7120 ------------------------------------------------------------------------------ Xperia(TM) PLAY It's a major breakthrough. An authentic gaming smartphone on the nation's most reliable network. And it wants your games. http://p.sf.net/sfu/verizon-sfdev _______________________________________________ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
