Hi, Okay, maybe I should delve into the code for this, but I (and probably Joao too) was wondering how (if) Pymol determines the valence of a bond. I.e. can Pymol distinguish between ethane, ethene, and ethyne?
Cheers, Tsjerk On Thu, Jul 1, 2010 at 5:58 PM, João Rodrigues <anar...@gmail.com> wrote: > Hey Jason, > > Thanks! I'd "traced" add_H to that function before but my knowledge of C is > rudimentary so I was quite overwhelmed. > > Yet, I think I managed to understand a bit better what's going on, but > correct me if I'm wrong. It seems PyMol looks for neighbours first, derives > a "bonding network" from that, and then calculates valences. > > Thanks a lot for the help! And good luck with the new city! > > João > > ------------------------------------------------------------------------------ > This SF.net email is sponsored by Sprint > What will you do first with EVO, the first 4G phone? > Visit sprint.com/first -- http://p.sf.net/sfu/sprint-com-first > _______________________________________________ > PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) > Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users > Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net > -- Tsjerk A. Wassenaar, Ph.D. post-doctoral researcher Molecular Dynamics Group Groningen Institute for Biomolecular Research and Biotechnology University of Groningen The Netherlands ------------------------------------------------------------------------------ This SF.net email is sponsored by Sprint What will you do first with EVO, the first 4G phone? Visit sprint.com/first -- http://p.sf.net/sfu/sprint-com-first _______________________________________________ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
