Hi Thomas, > To address your question, it is not possible to my knowledge to upload > a sequence only to PyMOL. Keep in mind that PyMOL is a molecular > viewer, not a sequence viewer. If you want to see your sequence, you > probably would have to create a 3D model of your sequence (e.g. using > MODELLER).
You can load FASTA files into PyMOL. Good luck understanding the results though. For example: # fetch a protein and save its sequence fetch 1cll, async=0 save 1cll.fasta, 1cll # delete everything & load the FASTA file dele * load 1cll.fasta Cheers, -- Jason -- Jason Vertrees, PhD PyMOL Product Manager Schrodinger, LLC (e) jason.vertr...@schrodinger.com (o) +1 (603) 374-7120 ------------------------------------------------------------------------------ _______________________________________________ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
