Song,

This is a naming error that occurs among different distributions.  It
should be fixed in the next release.  If you need more details ping
Michael Lerner or http://pymolwiki.org/index.php/APBS.

-- Jason



On Mon, Feb 15, 2010 at 8:12 PM, Song Tan <sx...@psu.edu> wrote:
> I'm trying to use the APBS plugin with PyMOLHybridX11 running on Mac OS X,
> but I keep encountering the following error when I use an externally
> generated PQR (generated using pdb2pqr).
> ObjectMapLoadDXFile-Error: Unable to open file!
> ObjectMapLoadDXFile: Does 'pymol-generated.dx' exist?
> [pymol-generated.dx does not exist in the temporary file location]
> I don't get this error message when I use PyMOL generated PQR, but I do get
> a different error message telling me to use another PQR).
> Googling this error message comes up with several postings describing the
> same error, but none of the comments or solutions have helped me.
> I know that I was able to use the APBS plugin with PyMOLHybridX11 a few
> months ago, but I'm not sure what's different now.
> Setup:  Mac OS X 10.6, PyMOLHybridX11 1.2r2 or 1.2r3
> same problem on both a Mac Pro and on a MacBook Pro.
> Any suggestions would be greatly appreciated!
> Song
> ---------------------------------------
> Dr. Song Tan
> Associate Professor in Biochemistry & Molecular Biology
> Center for Eukaryotic Gene Regulation
> Dept of Biochemistry & Molecular Biology
> 108 Althouse Laboratory   (office in 468A North Frear Lab)
> Penn State University
> University Park, PA   16802
> email:  sx...@psu.edu
> phone:  814-865-3355     fax: 814-863-7024
> http://www.bmb.psu.edu/faculty/tan/lab/
>
>
>
>
>
>
> ------------------------------------------------------------------------------
> SOLARIS 10 is the OS for Data Centers - provides features such as DTrace,
> Predictive Self Healing and Award Winning ZFS. Get Solaris 10 NOW
> http://p.sf.net/sfu/solaris-dev2dev
> _______________________________________________
> PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net)
> Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users
> Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
>



-- 
Jason Vertrees, PhD
PyMOL Product Manager
Schrodinger, LLC

(e) jason.vertr...@schrodinger.com
(o) +1 (603) 374-7120

------------------------------------------------------------------------------
SOLARIS 10 is the OS for Data Centers - provides features such as DTrace,
Predictive Self Healing and Award Winning ZFS. Get Solaris 10 NOW
http://p.sf.net/sfu/solaris-dev2dev
_______________________________________________
PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net)
Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users
Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net

Reply via email to