Jens,

Unfortunately, those values are hardcoded.  However, if you load a coordinate 
file into PyMOL with alternate bond distances, and only modify dihedrals or use 
the sculpting capability, then the input bond distances should be preserved 
(for the most part).

Cheers,
Warren

-----Original Message-----
From: Jens Carlsson [mailto:jens7...@gmail.com]
Sent: Sat 10/3/2009 8:36 AM
To: pymol-users@lists.sourceforge.net
Subject: [PyMOL] change bond length
 
How do I change the bond length between two atoms from the command
line, e.g. change the C-H bond from 1.09 to 1 Angstrom?

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