I'm trying to use a suggestion another pymol user sent to create a sphere of a specific size in a pdb file. Is this the correct coding? I have no experience doing any kind of programming so I am not sure if I did this right. I put the text I entered in in red if that helps anything.
ben
create sphere, resi 24 and resi 864 create a new object from resi 864
alter sphere, vdw=10.0 # 28.5
rebuild # necessary if spheres have already been shown
show spheres, sphere
alter_state 1, sphere, x,y,z = 50,60,10 # set desired x,y,z coords
set sphere_transparency, 0.5, sphere # make it transparent
zoom
ray
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