Once an molecule is loaded into PyMOL, you can always alter selection, vdw=value e.g.
load unknown.pdb alter unknown and symbol Xz, vdw=3.0 alter unknown and symbol Y, vdw=2.4 rebuild etc. Cheers, Warren > -----Original Message----- > From: Joachim Reichelt [mailto:joachim.reich...@helmholtz-hzi.de] > Sent: Tuesday, February 03, 2009 6:52 AM > To: pymol-users@lists.sourceforge.net > Subject: [PyMOL] Cofactor Spheres size > > Dear all, > > we are interested in Molecules with Atoms "unknown" to pymol. > So pymol does not know the vdW radius of these atome. > Where can I define those values? > -- > Joachim > > -------------------------------------------------------------- > ---------------- > Create and Deploy Rich Internet Apps outside the browser with > Adobe(R)AIR(TM) software. With Adobe AIR, Ajax developers can > use existing skills and code to build responsive, highly > engaging applications that combine the power of local > resources and data with the reach of the web. Download the > Adobe AIR SDK and Ajax docs to start building applications > today-http://p.sf.net/sfu/adobe-com > _______________________________________________ > PyMOL-users mailing list > PyMOL-users@lists.sourceforge.net > https://lists.sourceforge.net/lists/listinfo/pymol-users > > > > >
