Hi, I would like to define the radius of the cartoon putty on absolute, rather than a relative scale. Is there any way to do this? If I am comparing rmsd, for example, I would like every image to be representative of the true RMSD differences, rather than being a unique relative scale for each comparison.
I notice that others have also asked about this in the past, but I did not see a response on the Pymol-Users Email Archive. Maybe there are new features in 1.1 that address this? [PyMOL] putty tube representation From: Evan Kantrowitz <evan.kantrow...@bc...> - 2007-08-09 21:37 Attachments: HTML-Email.html I am making tube representations as a comparison between two structures. I have the rmsd in the b-factor field. 1) If I do a putty representation it works. How does the program decide on the width variation of the tube? 2) How can this be reset? I want to do this so when I compare two different rmsd plots the width of lets say 1 rms is the same in both figures. Any help would be apprecipated. ------------------------------------------------------------------- Evan R. Kantrowitz, Ph.D evan.kantrowitz Boston College Yours sincerely, Mark A. White, Ph.D. Assistant Professor, Dept. Biochemistry and Molecular Biology, Manager, Sealy Center for Structural Biology and Molecular Biophysics X-ray Crystallography Laboratory, Basic Science Building, Room 6.660 C University of Texas Medical Branch Galveston, TX 77555-0647 Tel. (409) 747-4747 Cell. (409) 539-9138 Fax. (409) 747-4745 mailto://wh...@xray.utmb.edu http://xray.utmb.edu http://xray.utmb.edu/~white
