load some_smet_containing.pdb flag ignore, clear, resn mse
show surface (or "rebuild" if surface is already shown) -- DeLano Scientific LLC Subscriber Support Services mailto:del...@delsci.info "Not yet a PyMOL Subscriber, but want to support the project? Email sa...@delsci.com to quote your lab, school, or employer. Thank you for sponsoring this open-source endeavor!" -WLD > -----Original Message----- > From: pymol-users-boun...@lists.sourceforge.net > [mailto:pymol-users-boun...@lists.sourceforge.net] On Behalf > Of Eric Larson > Sent: Monday, June 11, 2007 1:41 PM > To: pymol-users@lists.sourceforge.net > Subject: [PyMOL] bug in pymol surface rendering? > > Hello, > > I would like to report an apparent bug in Pymol's surface > rendering. I am using version 0.99rc1. > > Pymol does not render a surface around SelenoMet residues. > It leaves a large hole in the surface surrounding them. The > residue is fully visible in this surface hole when turning on > sticks with the surface. After mutating MSE to MET, the > surface "hole" is filled in and the stick representation of > the residue is now no longer visible (unless the surface is > made transparent). > > Thanks, > > Eric > > > -------------------------------------------------------------- > ----------- > This SF.net email is sponsored by DB2 Express Download DB2 > Express C - the FREE version of DB2 express and take control > of your XML. No limits. Just data. Click to get it now. > http://sourceforge.net/powerbar/db2/ > _______________________________________________ > PyMOL-users mailing list > PyMOL-users@lists.sourceforge.net > https://lists.sourceforge.net/lists/listinfo/pymol-users
