Pre 1.0: fragment methane, mysph remove hydro and mysph alter mysph, vdw=2.0 as spheres, mysph set sphere_transparency, 0.5, mysph Post 1.0: pseudoatom mysph, vdw=2.0 as spheres, mysph set sphere_transparency, 0.5, mysph Cheers, Warren
_____ From: pymol-users-boun...@lists.sourceforge.net [mailto:pymol-users-boun...@lists.sourceforge.net] On Behalf Of jjv5 Sent: Friday, April 06, 2007 4:55 AM To: PyMOL-users@lists.sourceforge.net Subject: [PyMOL] Single transparent sphere Hi, Does anyone know of a good way to create a single transparent sphere of varying size? We've tried using a single atom and changing the vdw, but we are unable to produce a surface of a single atom. CGO objects work but cannot be made transparent. What we'd really like is a transparent CGO sphere. Any ideas? Thanks, Jim
