Congratulations to Jason on his release, and having now run the code myself I can say that this is a pretty darn nifty tool: Quick protein structure alignment right within PyMOL without reliance upon sequence similarity! Amazing.
Cheers, Warren -----Original Message----- From: pymol-users-boun...@lists.sourceforge.net [mailto:pymol-users-boun...@lists.sourceforge.net] On Behalf Of Jason Vertrees Sent: Tuesday, January 16, 2007 8:23 PM To: pymol-users@lists.sourceforge.net Subject: [PyMOL] CE Align & Wiki PyMolers, CE Align v0.1: Thanks to the help of some testers, I can now release the first version of CE Align -- a structure alignment plugin for PyMol. You can download it from the PyMolWiki (http://www.pymolwiki.org/index.php/Cealign) in BZ2 or ZIP format. Documentation and examples are provided. Also, good tests are provided on the wiki page. Please direct all comments/questions to me, unless it is PyMol list-specific. Installation should be straightforward, if you have a complete Python install with Numpy. Again, please read the documentation. Briefly, the requirements are: Numpy Python PyMol C compiler and setup, should be as simple as: python setup.py install then running the two python scripts, QKabsch.py and cealign.py. See the wiki page for help, examples, etc. PyMolWiki: Tonight I upgraded the software on the PyMolWiki. It now supports a pseudo-captcha for spam protection. But, this could easily by bypassed, so a new more elegant solution will be implemented soon. The good news is that users can register themselves now! Please check it out and let me know if you find any errors or unexpected responses from the wiki. Cheers, -- Jason Vertrees (javer...@utmb.edu) http://vertrees.org/ -- HOME http://pymolwiki.org/ -- PyMol Wiki http://best.utmb.edu/ -- Protein Science http://www.andeanimporters.com/ -- Biz. ------------------------------------------------------------------------- Take Surveys. Earn Cash. Influence the Future of IT Join SourceForge.net's Techsay panel and you'll get the chance to share your opinions on IT & business topics through brief surveys - and earn cash http://www.techsay.com/default.php?page=join.php&p=sourceforge&CID=DEVDEV _______________________________________________ PyMOL-users mailing list PyMOL-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/pymol-users
