[PyMOL] Displaying/defining double bonds in a ligand molecule

[Wulf Blankenfeldt]

Hello pymolers,

I'd like to display double bonds in a small molecule ligand bound to the 
active centre of a protein. Of course, the ligand is non-standard, i.e. 
pymol doesn't know about its chemical nature. Googling a bit, I found 
that I can

set valence, 0.1

but this only display double bonds in the protein, which I don't want.

How do I teach pymol to display double bonds in my ligand?


Thanks for your help,




Wulf